Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907265.1_cds_XP_016457403.1_51132
CDS Infomation

[gene=LOC107781242] [db_xref=GeneID:107781242] [protein=SEC1 family transport protein SLY1-like] [protein_id=XP_016457403.1] [location=join(9858..9888,9998..10336,11006..12498)] [gbkey=CDS]
Sequence

ATGGCGCTCAATCTTCGTCAAAAACATACAGAGTGCATTACGCGGATGTTAAATCTGAAC
CAGCCGGTGAATGCCGGCGGCACAGCTAACGAGGAGGTTTACAAGATCCTTATTTACGAT
CGCTTTTGCCAGGACATACTATCGCCGCTGATTCACGTGAAGGATCTCCGTAAGCACGGC
GTTACTCTCTATTTCCTCATTGACAAGGATCGCAAGCCCGTTCACGATGTTCCTGCTGTC
TATTTCGTCCGACCTACTCACCTCAACGTTCAGCGCATCATTTCCGACGCCTCTAACTCT
CTTTATGATTCGTTCCATTTGAATTTCTCAGCCTCCATTCCTAGACCTTTACTCGAGGAT
CTCGCTTCAGGTACGATTAATTCAGAGTCGATTGAGAGGATTGCAAAAGTGCATGATCAG
TACTTGGAGTTTATCACGCTTGAGGATAATTTGTTCTCCCTTGCCAACAAGAACTGTTAT
GTTCAGTTAAATGATCCCTCAGCTGGGGATAAGGAAATTGACGAGATTGTTGAAAAGATT
GTCAGCGGGTTGTTTTGTGTCTTGGCTACTCTTGCTGTTGTCCCTGTCATCAGGTGTCCT
CGTGGTGGGCCCGCTGAGATGGTGGCATCCCTGTTGGATCAGAGACTGCGGGACCATTTG
CTGGTGAAGAACAATTTGTTTTCAGAGGGTGGGAATTTGACTGGCTCATTTCAGAGGCCA
GTTTTGTGTTTATTTGATCGGAACTTTGAATTGGCAGTGGCAATACAGCATGATTTTAGG
TATAGGCCACTTGTTCATGATGTGCTTGGGTTGAGATTGAACAGATTAAGCGTGCCAGGA
GACAAGGGTGGGATGAAATCCTATGAGTTAGATAGGTCTGATCCATTTTGGATGGCCAAC
GGGTCATTGGAATTTCCAGAGGTTGCAGTGGAGATAGAGTCTCAATTGAATAAATACAAG
AAGGATGTTGAGGAGGTAAATAAACGAACAGGTGGCAGTGGAGGGCCCGAGTTTGATGGA
ACAGATTTGGTAGGTAATACTAAACATTTGATGAATGCTGTAAATTCCCTACCTGAGTTG
ACTGAGCGAAAGCAAGTGATCGATAAGCACACAAATATTGCTACTTCATTATTGAGCGAG
ATCAAGGAGAGATCCCTCGATTCATATGCTAAAACAGAGAGGGATATGCTGGTGAGAGGC
GGCATTGATCGTAATGAGCTCCTTGGAGTGCTGAAGGGAAAAGGGAGTAAGGCAGATAAG
CTGCGATTCGCTATAATTTTTCTTATCTCAACTGAAAGCATGCCTCAATCTGAAGTCGAA
ATGATTGAAGCAGCACTTAGGGAGTCCGAGGTTGATACCAGTGCTTTCCAGTATATAAAG
AAGATAAAATCATTGAATGTCTCTTTTGCATCAGCAAATTCTGCAAGTACGAGCAACATT
GTTGATTGGGCTGAAAAACTATATGGGCAATCAATCAGTGCTGTAACTGCAGGTGTGAAG
AATCTATTATCCACTGATCATCAGTTGGCTTTGACGAGAGCAGTAGAAGCATTAATGGAG
GGGAAACCAAATCCTGAAATAGAATCTTATCTTCTTCTTGATCCTCGTGCACCGAAGTCA
AGCTCTGCATCTAGCAGCAGTCACCTAAAAGGACCATTTAAAGAAGCTATAGTCTTTATG
ATAGGTGGTGGAAATTACGTGGAGTATGGAAGCTTGCAAGAGCTTGCCAATCGCCAACAG
CCGGTCAAGCATGTCATATACGGGACAACAGAAATTCTTACAGGAGGTGAGTTCATTGAG
CAGCTTGCAGTACTGGGGCAAAAGATGGGATTGGGAAGCAGTGGGGCTGCACCTCCCCAT
TGA

Peptide Sequence

PEP ID

XP_016457403.1
PEP Infomation

PREDICTED: SEC1 family transport protein SLY1-like [Nicotiana tabacum]
Sequence

MALNLRQKHTECITRMLNLNQPVNAGGTANEEVYKILIYDRFCQDILSPLIHVKDLRKHG
VTLYFLIDKDRKPVHDVPAVYFVRPTHLNVQRIISDASNSLYDSFHLNFSASIPRPLLED
LASGTINSESIERIAKVHDQYLEFITLEDNLFSLANKNCYVQLNDPSAGDKEIDEIVEKI
VSGLFCVLATLAVVPVIRCPRGGPAEMVASLLDQRLRDHLLVKNNLFSEGGNLTGSFQRP
VLCLFDRNFELAVAIQHDFRYRPLVHDVLGLRLNRLSVPGDKGGMKSYELDRSDPFWMAN
GSLEFPEVAVEIESQLNKYKKDVEEVNKRTGGSGGPEFDGTDLVGNTKHLMNAVNSLPEL
TERKQVIDKHTNIATSLLSEIKERSLDSYAKTERDMLVRGGIDRNELLGVLKGKGSKADK
LRFAIIFLISTESMPQSEVEMIEAALRESEVDTSAFQYIKKIKSLNVSFASANSASTSNI
VDWAEKLYGQSISAVTAGVKNLLSTDHQLALTRAVEALMEGKPNPEIESYLLLDPRAPKS
SSASSSSHLKGPFKEAIVFMIGGGNYVEYGSLQELANRQQPVKHVIYGTTEILTGGEFIE
QLAVLGQKMGLGSSGAAPPH

Transcript Sequence

Gene sequence data has not been registered.